miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|167473552|gb|FD962263.1|FD962263 GGAAAATTAGGGTTAACGAATTCGGAATCAGCATCCATGGAAGAGATTACAGAGAGAGTGAACAACATGAACTTGGCCAA
TGATTCCCAGAAGAAGAACCGGATTCAGGTTTCCAACACCAAGAAACCATTGTTCTTCTACGTCAACCTCGCCAAGAGGT
ATATGCAAGAGCACAATGATGTTGAATTGTCTGCCCTTGGGATGGCCATTGCAACCGTTGTTACCATTGCTGAGATACTC
AAGAACAATGGTTTTGCTGTTGAGAAGAAGATCATGACTTCTACTGTGGATATTAAGGATGGCTCAAGGGGACGTCCTGT
GCAGAAACCTAAGATCGAAATCACGCTTGGGAAGTCAGAGAAGTTTGATGAACTAATGGCTGCAGCCAATGAAGAAAAAG
AAGCTGCAGATGCTCAAGTCCAGAGCTGAACATAGCCCTTCTTATGTTATGGTTTCATGGGTCTTTCTTCTGTCTTGATG
CTTTATATTATTTGTTTAATTTCATTGATTTTTGGCTGAATTTGAGTTTGTTATGTTTTGGATGGTTTGTTGTACCTGTT
GAAACACTTTACAATACTATATGATATTTTTAGTTACAAAGAGCAAAAAAAAAAAAAAAAAAA




Most similar to sp|O22969|Y2416_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160
           OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1
          Length = 130

 Score =  196 bits (497), Expect = 1e-49
 Identities = 100/111 (90%), Positives = 105/111 (94%)
 Frame = +1

Query: 37  MEEITERVNNMNLANDSQKKNRIQVSNTKKPLFFYVNLAKRYMQEHNDVELSALGMAIAT 216
           MEEIT+ VNNMNLA DSQKKNRIQVSNTKKPLFFYVNLAKRYMQ++NDVELSALGMAIAT
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 217 VVTIAEILKNNGFAVEKKIMTSTVDIKDGSRGRPVQKPKIEITLGKSEKFD 369
           VVT+ EILKNNGFAVEKKIMTSTVDIKD +RGRPVQK KIEITL KSEKFD
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFD 111